Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_12215 | Not Available | Negative | 2921079 - 2922107 | 39136.4 |
| lipopolysaccharide biosynthesis protein | A5893_12220 | Not Available | Negative | 2922109 - 2923158 | 38764.4 |
| capsule biosynthesis protein | A5893_12225 | Not Available | Negative | 2923261 - 2925762 | 92191.4 |
| gdp-mannose 4,6-dehydratase | A5893_12230 | Not Available | Negative | 2925977 - 2927116 | 43016.6 |
| glucose-1-phosphate thymidylyltransferase | A5893_12235 | Not Available | Negative | 2927241 - 2928113 | 31767.6 |
| hypothetical protein | A5893_12240 | Not Available | Negative | 2928151 - 2928723 | 21612.7 |
| hexapeptide transferase | A5893_12245 | Not Available | Negative | 2928922 - 2929425 | 18159.0 |
| degt/dnrj/eryc1/strs aminotransferase | A5893_12250 | Not Available | Negative | 2929418 - 2930521 | 40971.8 |
| vi polysaccharide biosynthesis protein vipa/tvib | A5893_12255 | Not Available | Negative | 2930536 - 2931801 | 47120.9 |
| 2-phosphosulfolactate phosphatase | A5893_12260 | Not Available | Negative | 2931951 - 2932664 | 26217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
