Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | A5893_00800 | Not Available | Positive | 238552 - 240012 | 53348.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | A5893_00805 | Not Available | Positive | 240020 - 241315 | 48306.3 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | A5893_00810 | Not Available | Positive | 241402 - 242751 | 50344.2 |
| cell division protein ftsw | A5893_00815 | Not Available | Positive | 242753 - 243928 | 42614.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | A5893_00820 | Not Available | Positive | 244049 - 245149 | 39569.7 |
| udp-n-acetylmuramate--l-alanine ligase | A5893_00825 | Not Available | Positive | 245153 - 246505 | 50241.5 |
| cell division protein ftsq | A5893_00830 | Not Available | Positive | 246498 - 247367 | 32932.2 |
| cell division protein ftsa | A5893_00835 | Not Available | Positive | 247370 - 248713 | 48663.0 |
| cell division protein ftsz | A5893_00840 | Not Available | Positive | 248840 - 250465 | 59637.4 |
| multidrug transporter | A5893_00845 | Not Available | Positive | 250835 - 252073 | 46340.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
