Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | A5893_12065 | Not Available | Positive | 2888668 - 2889747 | 39879.9 |
| hypothetical protein | A5893_12070 | Not Available | Positive | 2890001 - 2891944 | 73073.4 |
| hypothetical protein | A5893_12075 | Not Available | Positive | 2891970 - 2893238 | 45419.0 |
| transcriptional regulator | A5893_12080 | Not Available | Negative | 2893295 - 2893990 | 26149.8 |
| hypothetical protein | A5893_12085 | Not Available | Negative | 2894289 - 2895554 | 49319.3 |
| gliding motility protein remb | A5893_12090 | Not Available | Negative | 2895559 - 2897160 | 61469.4 |
| polysaccharide biosynthesis protein | A5893_12095 | Not Available | Negative | 2897160 - 2899088 | 73110.6 |
| glycosyl transferase family 4 | A5893_12100 | Not Available | Negative | 2899162 - 2900151 | 37342.3 |
| hypothetical protein | A5893_12105 | Not Available | Negative | 2900372 - 2900665 | 10857.3 |
| transcriptional regulator | A5893_12110 | Not Available | Positive | 2900797 - 2901186 | 14786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
