Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_12015 | Not Available | Negative | 2874350 - 2874730 | 14895.1 |
| hypothetical protein | A5893_12020 | Not Available | Positive | 2874894 - 2876006 | 42110.1 |
| dimethylhistidine n-methyltransferase | A5893_12025 | Not Available | Negative | 2876149 - 2877090 | 36361.1 |
| sulfatase maturase | A5893_12030 | Not Available | Negative | 2877096 - 2878247 | 45075.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | A5893_12035 | Not Available | Negative | 2878462 - 2878938 | 17293.0 |
| hypothetical protein | A5893_12040 | Not Available | Negative | 2878939 - 2880102 | 42409.6 |
| hypothetical protein | A5893_12045 | Not Available | Negative | 2880142 - 2883978 | 142938.0 |
| gliding motility lipoprotein gldj | A5893_12050 | Not Available | Positive | 2884134 - 2885789 | 60896.7 |
| hypothetical protein | A5893_12055 | Not Available | Negative | 2885867 - 2887198 | 50406.5 |
| hypothetical protein | A5893_12060 | Not Available | Positive | 2887295 - 2888533 | 46307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
