Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | A5893_11915 | Not Available | Negative | 2853014 - 2853928 | 33550.5 |
| Trna-asn | Not Available | Not Available | Positive | 2854064 - 2854137 | Not Available |
| hypothetical protein | A5893_11925 | Not Available | Positive | 2854189 - 2854491 | 11866.4 |
| hypothetical protein | A5893_11930 | Not Available | Negative | 2855017 - 2855883 | 30867.1 |
| n-acyl-l-amino acid amidohydrolase | A5893_11935 | Not Available | Negative | 2855983 - 2857290 | 46901.0 |
| dna mismatch repair protein muts | A5893_11940 | Not Available | Negative | 2857364 - 2858308 | 36118.3 |
| hypothetical protein | A5893_11945 | Not Available | Negative | 2858505 - 2860814 | 88149.6 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | A5893_11950 | Not Available | Positive | 2861232 - 2863688 | 89404.6 |
| homoserine kinase | A5893_11955 | Not Available | Positive | 2863786 - 2864712 | 33061.6 |
| threonine synthase | A5893_11960 | Not Available | Positive | 2864819 - 2866120 | 48738.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
