Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11765 | Not Available | Positive | 2827671 - 2828294 | 24555.7 |
| cysteine methyltransferase | A5893_11770 | Not Available | Negative | 2828296 - 2828637 | 12593.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | A5893_11775 | Not Available | Negative | 2828637 - 2829284 | 25092.0 |
| gdp-fucose synthetase | A5893_11780 | Not Available | Positive | 2829346 - 2830275 | 35049.2 |
| hypothetical protein | A5893_11785 | Not Available | Negative | 2830375 - 2830845 | 17522.5 |
| hypothetical protein | A5893_11790 | Not Available | Negative | 2830848 - 2831204 | 12968.3 |
| hypothetical protein | A5893_11795 | Not Available | Negative | 2831216 - 2831491 | 9815.57 |
| ai-2e family transporter | A5893_11800 | Not Available | Negative | 2831581 - 2832615 | 38924.1 |
| hypothetical protein | A5893_11805 | Not Available | Negative | 2832743 - 2833255 | 19407.9 |
| rna polymerase subunit sigma | A5893_11810 | Not Available | Negative | 2833252 - 2833830 | 22391.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
