Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11710 | Not Available | Positive | 2810955 - 2812781 | 65340.8 |
| hypothetical protein | A5893_11715 | Not Available | Positive | 2812815 - 2813960 | 41943.1 |
| hypothetical protein | A5893_11720 | Not Available | Positive | 2814108 - 2816624 | 94522.4 |
| hypothetical protein | A5893_11725 | Not Available | Negative | 2816640 - 2817329 | 25412.4 |
| hypothetical protein | A5893_11730 | Not Available | Negative | 2817326 - 2817739 | 15873.2 |
| cytochrome c oxidase accessory protein ccog | A5893_11735 | Not Available | Negative | 2817745 - 2819121 | 52751.7 |
| cytochrome c | A5893_11740 | Not Available | Negative | 2819232 - 2820089 | 32174.3 |
| cytochrome c oxidase cbb3 | A5893_11745 | Not Available | Negative | 2820284 - 2822398 | 80156.7 |
| 4-hydroxybutyrate coa-transferase | A5893_11750 | Not Available | Positive | 2822688 - 2823971 | 47058.5 |
| [fe-s]-binding protein | A5893_11760 | Not Available | Positive | 2826278 - 2827663 | 52057.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
