Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11660 | Not Available | Negative | 2796544 - 2797578 | 39969.1 |
| sam-dependent methyltransferase | A5893_11665 | Not Available | Negative | 2797575 - 2798288 | 26404.9 |
| hypothetical protein | A5893_11670 | Not Available | Positive | 2798771 - 2800039 | 48537.5 |
| hypothetical protein | A5893_11675 | Not Available | Positive | 2800169 - 2800768 | 23286.4 |
| hypothetical protein | A5893_11680 | Not Available | Positive | 2800840 - 2801778 | 35444.5 |
| susc/raga family tonb-linked outer membrane protein | A5893_11685 | Not Available | Positive | 2801933 - 2805370 | 125206.0 |
| hypothetical protein | A5893_11690 | Not Available | Positive | 2805382 - 2806833 | 54081.9 |
| hypothetical protein | A5893_11695 | Not Available | Positive | 2806818 - 2808413 | 56543.9 |
| metallophosphoesterase | A5893_11700 | Not Available | Positive | 2808463 - 2809875 | 53894.6 |
| glycerophosphodiester phosphodiesterase | A5893_11705 | Not Available | Positive | 2810012 - 2810917 | 34651.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
