Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase | A5893_00750 | Not Available | Positive | 228800 - 229480 | 25668.8 |
| oxidoreductase | A5893_00755 | Not Available | Positive | 229477 - 230175 | 24578.8 |
| hypothetical protein | A5893_00760 | Not Available | Positive | 230176 - 230832 | 24344.9 |
| hypothetical protein | A5893_00765 | Not Available | Positive | 230921 - 231568 | 25332.1 |
| abc transporter | A5893_00770 | Not Available | Positive | 231668 - 232978 | 49733.7 |
| phosphoglycerate kinase | A5893_00775 | Not Available | Positive | 233088 - 234278 | 43032.7 |
| division/cell wall cluster transcriptional repressor mraz | A5893_00780 | Not Available | Positive | 234684 - 235151 | 17635.0 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | A5893_00785 | Not Available | Positive | 235141 - 236046 | 33983.8 |
| hypothetical protein | A5893_00790 | Not Available | Positive | 236043 - 236447 | 15356.7 |
| cell division protein | A5893_00795 | Not Available | Positive | 236449 - 238551 | 76843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
