Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11610 | Not Available | Positive | 2786463 - 2786978 | 18175.8 |
| short-chain dehydrogenase | A5893_11615 | Not Available | Negative | 2787037 - 2787786 | 26485.0 |
| dipeptide epimerase | A5893_11620 | Not Available | Negative | 2787844 - 2788863 | 37769.2 |
| cysteine methyltransferase | A5893_11625 | Not Available | Positive | 2788951 - 2789799 | 31821.5 |
| addiction module component chp02574 family protein | A5893_11630 | Not Available | Positive | 2789866 - 2790084 | 8561.24 |
| hypothetical protein | A5893_11635 | Not Available | Positive | 2790095 - 2790319 | 9057.97 |
| dna methylase | A5893_11640 | Not Available | Positive | 2790396 - 2790998 | 22951.6 |
| hypothetical protein | A5893_11645 | Not Available | Positive | 2791135 - 2792274 | 43848.0 |
| lmbe family protein | A5893_11650 | Not Available | Positive | 2792803 - 2795232 | 90623.8 |
| hypothetical protein | A5893_11655 | Not Available | Positive | 2795293 - 2796453 | 45284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
