Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11560 | Not Available | Positive | 2765962 - 2766513 | 21480.8 |
| hypothetical protein | A5893_11565 | Not Available | Positive | 2766497 - 2767876 | 51304.0 |
| hypothetical protein | A5893_11570 | Not Available | Positive | 2767974 - 2768753 | 28686.1 |
| dna repair protein rada | A5893_11575 | Not Available | Negative | 2768888 - 2770270 | 50800.5 |
| cell surface protein spra | A5893_11580 | Not Available | Negative | 2770596 - 2777591 | 263642.0 |
| holliday junction dna helicase ruva | A5893_11585 | Not Available | Negative | 2777654 - 2778238 | 21154.9 |
| malic enzyme | A5893_11590 | Not Available | Negative | 2778241 - 2780547 | 84550.7 |
| hypothetical protein | A5893_11595 | Not Available | Positive | 2780728 - 2781252 | 19414.8 |
| hypothetical protein | A5893_11600 | Not Available | Positive | 2781293 - 2784931 | 126344.0 |
| hypothetical protein | A5893_11605 | Not Available | Positive | 2784966 - 2786450 | 53520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
