Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter substrate-binding protein | A5893_11505 | Not Available | Positive | 2756205 - 2757098 | 33521.8 |
| hypothetical protein | A5893_11510 | Not Available | Positive | 2757121 - 2758794 | 62659.9 |
| pyrophosphatase | A5893_11515 | Not Available | Negative | 2758848 - 2759174 | 12311.9 |
| d-tyrosyl-trna(tyr) deacylase | A5893_11520 | Not Available | Negative | 2759176 - 2759628 | 16596.4 |
| ribonuclease g | A5893_11525 | Not Available | Negative | 2759718 - 2761268 | 58487.7 |
| hypothetical protein | A5893_11530 | Not Available | Negative | 2761521 - 2762369 | 31090.2 |
| integration host factor subunit beta | A5893_11535 | Not Available | Negative | 2762372 - 2762671 | 10797.3 |
| a/g-specific adenine glycosylase | A5893_11540 | Not Available | Positive | 2762841 - 2763890 | 40676.6 |
| single-stranded dna-binding protein | A5893_11545 | Not Available | Positive | 2763911 - 2764357 | 16711.7 |
| rna polymerase subunit sigma-24 | A5893_11555 | Not Available | Positive | 2765405 - 2765965 | 21998.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
