Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11455 | Not Available | Positive | 2748417 - 2749415 | 37710.5 |
| hypothetical protein | A5893_11460 | Not Available | Positive | 2749405 - 2749890 | 18767.9 |
| methionine adenosyltransferase | A5893_11465 | Not Available | Negative | 2749970 - 2751223 | 45991.6 |
| diacylglycerol kinase | A5893_11470 | Not Available | Positive | 2751425 - 2752297 | 32159.3 |
| sui1 family translation initiation factor | A5893_11475 | Not Available | Positive | 2752310 - 2752669 | 13205.2 |
| flagellar motor protein mota | A5893_11480 | Not Available | Positive | 2753040 - 2753864 | 28817.1 |
| biopolymer transporter exbd | A5893_11485 | Not Available | Positive | 2753940 - 2754551 | 22982.8 |
| biopolymer transporter exbd | A5893_11490 | Not Available | Positive | 2754563 - 2755108 | 19966.3 |
| energy transducer tonb | A5893_11495 | Not Available | Positive | 2755145 - 2755966 | 29965.1 |
| hypothetical protein | A5893_11500 | Not Available | Positive | 2755976 - 2756212 | 9456.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
