Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11305 | Not Available | Negative | 2715101 - 2715766 | 25187.1 |
| hypothetical protein | A5893_11310 | Not Available | Negative | 2715779 - 2716654 | 34081.7 |
| dna mismatch repair protein mutt | A5893_11315 | Not Available | Negative | 2716721 - 2717956 | 46838.3 |
| magnesium chelatase | A5893_11320 | Not Available | Negative | 2718159 - 2719649 | 56370.8 |
| hypothetical protein | A5893_11325 | Not Available | Negative | 2719772 - 2720869 | 41416.6 |
| hypothetical protein | A5893_11330 | Not Available | Negative | 2721056 - 2722012 | 34545.9 |
| hypothetical protein | A5893_11335 | Not Available | Negative | 2722076 - 2723539 | 55558.1 |
| hypothetical protein | A5893_11340 | Not Available | Negative | 2723532 - 2723927 | 15384.4 |
| hypothetical protein | A5893_11345 | Not Available | Negative | 2723933 - 2726656 | 104769.0 |
| sigma-54-dependent fis family transcriptional regulator | A5893_11350 | Not Available | Negative | 2726771 - 2728192 | 52946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
