Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | A5893_11205 | Not Available | Negative | 2683967 - 2684662 | 26680.4 |
| hypothetical protein | A5893_11210 | Not Available | Negative | 2685059 - 2685874 | 32294.5 |
| two-component sensor histidine kinase | A5893_11215 | Not Available | Negative | 2685901 - 2687742 | 69360.9 |
| beta-glucosidase | A5893_11220 | Not Available | Negative | 2688001 - 2690322 | 86029.9 |
| hypothetical protein | A5893_11225 | Not Available | Negative | 2690402 - 2691193 | 29015.4 |
| hypothetical protein | A5893_11230 | Not Available | Negative | 2691213 - 2692484 | 44819.8 |
| hypothetical protein | A5893_11235 | Not Available | Negative | 2692503 - 2694029 | 56116.2 |
| hypothetical protein | A5893_11240 | Not Available | Negative | 2694049 - 2697135 | 111258.0 |
| transcriptional regulator | A5893_11245 | Not Available | Positive | 2697465 - 2700368 | 111378.0 |
| nucleotide pyrophosphatase | A5893_11250 | Not Available | Negative | 2700570 - 2702231 | 61307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
