Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit iii | A5893_00700 | Not Available | Positive | 223016 - 223588 | 21928.4 |
| cytochrome oxidase subunit iii | A5893_00705 | Not Available | Positive | 223622 - 224320 | 26470.5 |
| caa(3)-type oxidase | A5893_00710 | Not Available | Positive | 224336 - 224677 | 13284.7 |
| hypothetical protein | A5893_00715 | Not Available | Positive | 224670 - 225374 | 27250.3 |
| hypothetical protein | A5893_00720 | Not Available | Positive | 225410 - 225982 | 21969.8 |
| hypothetical protein | A5893_00725 | Not Available | Positive | 225994 - 226269 | 9853.47 |
| hypothetical protein | A5893_00730 | Not Available | Positive | 226316 - 226705 | 15175.7 |
| tigr02453 family protein | A5893_00735 | Not Available | Positive | 226698 - 227366 | 25625.5 |
| hypothetical protein | A5893_00740 | Not Available | Positive | 227387 - 228220 | 31002.4 |
| 6-pyruvoyl tetrahydrobiopterin synthase | A5893_00745 | Not Available | Positive | 228400 - 228819 | 16424.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
