Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_11105 | Not Available | Negative | 2658679 - 2658957 | 10556.9 |
| excinuclease abc subunit b | A5893_11110 | Not Available | Negative | 2659166 - 2661196 | 77416.8 |
| hypothetical protein | A5893_11115 | Not Available | Positive | 2661641 - 2662894 | 48943.4 |
| hypothetical protein | A5893_11120 | Not Available | Positive | 2663066 - 2663662 | 23229.6 |
| hypothetical protein | A5893_11125 | Not Available | Positive | 2663664 - 2664290 | 24642.3 |
| hypothetical protein | A5893_11130 | Not Available | Positive | 2664681 - 2665112 | 16362.5 |
| hypothetical protein | A5893_11135 | Not Available | Negative | 2665145 - 2666935 | 67910.2 |
| pas domain-containing sensor histidine kinase | A5893_11140 | Not Available | Positive | 2667048 - 2668238 | 44757.7 |
| transcriptional regulator | A5893_11145 | Not Available | Positive | 2668235 - 2669281 | 39716.3 |
| hypothetical protein | A5893_11150 | Not Available | Positive | 2669394 - 2669867 | 17093.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
