Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m28 | A5893_11055 | Not Available | Negative | 2649686 - 2650987 | 47425.3 |
| hypothetical protein | A5893_11060 | Not Available | Negative | 2651291 - 2652226 | 36021.8 |
| hypothetical protein | A5893_11065 | Not Available | Negative | 2652236 - 2652739 | 19263.2 |
| two-component sensor histidine kinase | A5893_11070 | Not Available | Negative | 2652819 - 2654177 | 51939.9 |
| dna-binding response regulator | A5893_11075 | Not Available | Negative | 2654178 - 2654861 | 25690.6 |
| thiamine phosphate synthase | A5893_11080 | Not Available | Positive | 2655000 - 2655632 | 23045.5 |
| hypothetical protein | A5893_11085 | Not Available | Positive | 2655642 - 2656220 | 22047.6 |
| hypothetical protein | A5893_11090 | Not Available | Positive | 2656220 - 2656705 | 19018.9 |
| metalloprotease | A5893_11095 | Not Available | Negative | 2656749 - 2657600 | 30970.2 |
| 5-formyltetrahydrofolate cyclo-ligase | A5893_11100 | Not Available | Negative | 2657700 - 2658272 | 22039.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
