Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | A5893_10905 | Not Available | Negative | 2613677 - 2614804 | 42227.5 |
| thiamine-phosphate kinase | A5893_10910 | Not Available | Negative | 2614815 - 2615864 | 38256.8 |
| aldo/keto reductase | A5893_10915 | Not Available | Negative | 2616004 - 2617029 | 37707.7 |
| gliding motility lipoprotein gldh | A5893_10920 | Not Available | Negative | 2617152 - 2617622 | 18241.0 |
| hypothetical protein | A5893_10925 | Not Available | Negative | 2617622 - 2618932 | 50163.5 |
| hypothetical protein | A5893_10930 | Not Available | Negative | 2618965 - 2620116 | 44109.1 |
| hypoxanthine phosphoribosyltransferase | A5893_10935 | Not Available | Negative | 2620137 - 2620691 | 20722.4 |
| zinc protease | A5893_10940 | Not Available | Negative | 2620698 - 2621927 | 46407.7 |
| hypothetical protein | A5893_10945 | Not Available | Negative | 2622044 - 2622754 | 26862.8 |
| nucleoside-diphosphate sugar epimerase | A5893_10950 | Not Available | Positive | 2622842 - 2623498 | 24422.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
