Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | A5893_10855 | Not Available | Positive | 2604672 - 2605331 | 23500.3 |
| methanol dehydrogenase | A5893_10860 | Not Available | Negative | 2605404 - 2606186 | 26496.7 |
| hypothetical protein | A5893_10865 | Not Available | Negative | 2606198 - 2606626 | 16117.2 |
| lema family protein | A5893_10870 | Not Available | Negative | 2606653 - 2607231 | 21360.3 |
| fad-binding protein | A5893_10875 | Not Available | Positive | 2607322 - 2608887 | 57365.1 |
| coa-binding protein | A5893_10880 | Not Available | Positive | 2608898 - 2609263 | 13613.5 |
| l-sorbosone dehydrogenase | A5893_10885 | Not Available | Positive | 2609353 - 2610672 | 47538.8 |
| inorganic phosphate transporter | A5893_10890 | Not Available | Negative | 2610858 - 2611868 | 35478.1 |
| phosphate transport regulator | A5893_10895 | Not Available | Negative | 2611889 - 2612536 | 24434.2 |
| two-component sensor histidine kinase | A5893_10900 | Not Available | Negative | 2612602 - 2613657 | 40292.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
