Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | A5893_10755 | Not Available | Positive | 2585807 - 2586487 | 24778.2 |
| chromosomal replication initiation protein dnaa | A5893_10760 | Not Available | Negative | 2586670 - 2588097 | 54033.5 |
| metallophosphatase | A5893_10765 | Not Available | Negative | 2588196 - 2589143 | 35051.1 |
| hypothetical protein | A5893_10770 | Not Available | Negative | 2589121 - 2589861 | 27559.4 |
| methylmalonyl-coa mutase | A5893_10775 | Not Available | Negative | 2590057 - 2591604 | 57131.1 |
| hypothetical protein | A5893_10780 | Not Available | Negative | 2591616 - 2592143 | 20430.1 |
| [fe-s]-binding protein | A5893_10785 | Not Available | Positive | 2592235 - 2592585 | 12309.5 |
| hypothetical protein | A5893_10790 | Not Available | Negative | 2592665 - 2593351 | 25027.6 |
| tonb-dependent receptor | A5893_10795 | Not Available | Positive | 2593740 - 2595845 | 77020.5 |
| hypothetical protein | A5893_10800 | Not Available | Positive | 2595961 - 2596611 | 23917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
