Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | A5893_10705 | Not Available | Positive | 2571962 - 2572348 | 14369.2 |
| hypothetical protein | A5893_10710 | Not Available | Negative | 2572436 - 2574859 | 89755.2 |
| pseudouridine synthase | A5893_10715 | Not Available | Positive | 2574964 - 2576148 | 44124.9 |
| tonb-dependent receptor | A5893_10720 | Not Available | Negative | 2576296 - 2578635 | 87488.5 |
| transposase | A5893_10725 | Not Available | Negative | 2579047 - 2579568 | 20889.9 |
| hypothetical protein | A5893_10730 | Not Available | Positive | 2579928 - 2580290 | 14221.0 |
| hypothetical protein | A5893_10735 | Not Available | Positive | 2580513 - 2581466 | 35760.7 |
| endonuclease | A5893_10740 | Not Available | Negative | 2581447 - 2582283 | 31657.8 |
| abc transporter permease | A5893_10745 | Not Available | Negative | 2582381 - 2584972 | 95581.1 |
| abc transporter | A5893_10750 | Not Available | Negative | 2584989 - 2585699 | 25648.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
