Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | A5893_10655 | Not Available | Positive | 2563680 - 2564585 | 33386.6 |
| hypothetical protein | A5893_10660 | Not Available | Positive | 2564587 - 2565372 | 29936.0 |
| thiol-disulfide oxidoreductase | A5893_10665 | Not Available | Positive | 2565387 - 2565788 | 15309.8 |
| hypothetical protein | A5893_10670 | Not Available | Positive | 2565821 - 2566486 | 24529.3 |
| hypothetical protein | A5893_10675 | Not Available | Positive | 2566501 - 2566890 | 15421.4 |
| hypothetical protein | A5893_10680 | Not Available | Positive | 2567049 - 2567645 | 21365.7 |
| mfs transporter | A5893_10685 | Not Available | Positive | 2567857 - 2569071 | 44256.9 |
| hypothetical protein | A5893_10690 | Not Available | Negative | 2569082 - 2569711 | 22897.3 |
| hypothetical protein | A5893_10695 | Not Available | Positive | 2569855 - 2570058 | 7933.15 |
| glycoside hydrolase family 3 | A5893_10700 | Not Available | Positive | 2570059 - 2571783 | 64168.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
