Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | A5893_00650 | Not Available | Positive | 209624 - 211015 | 50374.6 |
| molybdopterin oxidoreductase | A5893_00655 | Not Available | Positive | 211054 - 214077 | 110190.0 |
| hydrogenase | A5893_00660 | Not Available | Positive | 214099 - 215571 | 55840.4 |
| quinol:cytochrome c oxidoreductase | A5893_00665 | Not Available | Positive | 215574 - 216110 | 20204.7 |
| cytochrome c | A5893_00670 | Not Available | Positive | 216082 - 216687 | 21955.5 |
| quinol:cytochrome c oxidoreductase | A5893_00675 | Not Available | Positive | 216703 - 217899 | 44943.4 |
| hypothetical protein | A5893_00680 | Not Available | Positive | 217914 - 219107 | 45135.3 |
| cytochrome c oxidase subunit i | A5893_00685 | Not Available | Positive | 219239 - 221023 | 66661.0 |
| cytochrome oxidase assembly protein | A5893_00690 | Not Available | Positive | 221095 - 222159 | 40514.7 |
| protoheme ix farnesyltransferase | A5893_00695 | Not Available | Positive | 222156 - 223013 | 31679.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
