Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_10555 | Not Available | Negative | 2540070 - 2540891 | 32103.7 |
| hypothetical protein | A5893_10560 | Not Available | Positive | 2541084 - 2542355 | 47541.1 |
| abc transporter permease | A5893_10565 | Not Available | Positive | 2542534 - 2543274 | 26576.8 |
| abc transporter atp-binding protein | A5893_10570 | Not Available | Positive | 2543274 - 2544044 | 28530.5 |
| abc transporter permease | A5893_10575 | Not Available | Positive | 2544051 - 2545034 | 35581.8 |
| carbohydrate kinase | A5893_10580 | Not Available | Positive | 2545154 - 2546635 | 53866.1 |
| xylose isomerase | A5893_10585 | Not Available | Positive | 2546648 - 2547955 | 49111.6 |
| peptidase m16 | A5893_10590 | Not Available | Negative | 2548352 - 2551195 | 105275.0 |
| nadr | A5893_10595 | Not Available | Negative | 2551478 - 2552014 | 20468.7 |
| nicotinamide mononucleotide transporter | A5893_10600 | Not Available | Negative | 2552048 - 2552686 | 24892.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
