Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_10505 | Not Available | Negative | 2523231 - 2523524 | 10449.4 |
| phospholipase | A5893_10510 | Not Available | Negative | 2523718 - 2524497 | 29697.8 |
| beta-glucosidase | A5893_10515 | Not Available | Negative | 2524494 - 2526788 | 83053.6 |
| hypothetical protein | A5893_10520 | Not Available | Negative | 2526811 - 2527470 | 25203.7 |
| 1,4-beta-xylanase | A5893_10525 | Not Available | Negative | 2527472 - 2529184 | 65369.5 |
| beta-glucosidase | A5893_10530 | Not Available | Negative | 2529331 - 2530671 | 51043.9 |
| hypothetical protein | A5893_10535 | Not Available | Negative | 2530724 - 2532232 | 54820.6 |
| carbohydrate-binding protein susd | A5893_10540 | Not Available | Negative | 2532253 - 2533779 | 55922.0 |
| susc/raga family tonb-linked outer membrane protein | A5893_10545 | Not Available | Negative | 2533808 - 2536822 | 109339.0 |
| transcriptional regulator | A5893_10550 | Not Available | Negative | 2537074 - 2539968 | 111345.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
