Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | A5893_10455 | Not Available | Positive | 2513277 - 2514479 | 46251.6 |
| ribosome-binding factor a | A5893_10460 | Not Available | Positive | 2514553 - 2514918 | 14168.0 |
| peptidase m23 | A5893_10465 | Not Available | Positive | 2514987 - 2515625 | 24173.8 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | A5893_10470 | Not Available | Negative | 2515713 - 2516669 | 35606.0 |
| histidine kinase | A5893_10475 | Not Available | Positive | 2516879 - 2517289 | 15484.8 |
| mbl fold hydrolase | A5893_10480 | Not Available | Negative | 2517279 - 2518058 | 29508.1 |
| single-stranded-dna-specific exonuclease recj | A5893_10485 | Not Available | Positive | 2518156 - 2519856 | 63973.7 |
| abc transporter atp-binding protein | A5893_10490 | Not Available | Positive | 2519860 - 2520594 | 27596.5 |
| hypothetical protein | A5893_10495 | Not Available | Positive | 2520784 - 2522295 | 58482.9 |
| hypothetical protein | A5893_10500 | Not Available | Positive | 2522309 - 2523229 | 36025.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
