Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transporter b | A5893_10405 | Not Available | Negative | 2500977 - 2503091 | 78501.8 |
| iron transporter | A5893_10410 | Not Available | Negative | 2503102 - 2503317 | 7809.84 |
| glycine cleavage system protein h | A5893_10415 | Not Available | Negative | 2503539 - 2503943 | 15700.6 |
| glycine cleavage system protein h | A5893_10420 | Not Available | Negative | 2503950 - 2504324 | 13576.0 |
| dna-3-methyladenine glycosylase | A5893_10425 | Not Available | Negative | 2504410 - 2504970 | 21920.1 |
| acyl-coa dehydrogenase | A5893_10430 | Not Available | Positive | 2505026 - 2506387 | 50544.4 |
| hypothetical protein | A5893_10435 | Not Available | Negative | 2506566 - 2509028 | 92046.8 |
| helicase snf2 | A5893_10440 | Not Available | Positive | 2509403 - 2512297 | 112437.0 |
| hypothetical protein | A5893_10445 | Not Available | Positive | 2512486 - 2512989 | 19360.0 |
| Trna-val | Not Available | Not Available | Positive | 2513090 - 2513167 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
