Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component ii | A5893_10245 | Not Available | Positive | 2460880 - 2461446 | 21028.4 |
| indole-3-glycerol phosphate synthase | A5893_10250 | Not Available | Positive | 2461564 - 2462346 | 28690.8 |
| hypothetical protein | A5893_10255 | Not Available | Negative | 2462343 - 2462645 | 12181.0 |
| hypothetical protein | A5893_10260 | Not Available | Negative | 2462630 - 2462866 | 9407.19 |
| hypothetical protein | A5893_10265 | Not Available | Negative | 2462921 - 2463916 | 37800.3 |
| hypothetical protein | A5893_10270 | Not Available | Negative | 2464032 - 2464673 | 22989.3 |
| histidine--trna ligase | A5893_10275 | Not Available | Positive | 2464894 - 2466258 | 50582.2 |
| glucose-1-phosphate adenylyltransferase | A5893_10280 | Not Available | Negative | 2466323 - 2467597 | 47111.4 |
| glycogen synthase | A5893_10285 | Not Available | Negative | 2467594 - 2469015 | 54051.0 |
| hypothetical protein | A5893_10290 | Not Available | Negative | 2469168 - 2470277 | 42972.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
