Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_10145 | Not Available | Negative | 2431876 - 2432067 | 7269.81 |
| 4-hydroxyphenylpyruvate dioxygenase | A5893_10150 | Not Available | Negative | 2432159 - 2433262 | 41690.2 |
| homogentisate 1,2-dioxygenase | A5893_10155 | Not Available | Negative | 2433438 - 2434598 | 44656.1 |
| peptidase m13 | A5893_10160 | Not Available | Negative | 2435055 - 2437088 | 75746.4 |
| hypothetical protein | A5893_10165 | Not Available | Positive | 2437318 - 2437968 | 25181.1 |
| recombinase recq | A5893_10170 | Not Available | Positive | 2438150 - 2440042 | 72879.6 |
| hypothetical protein | A5893_10175 | Not Available | Negative | 2440028 - 2440906 | 33821.2 |
| hypothetical protein | A5893_10180 | Not Available | Negative | 2440919 - 2441392 | 18270.3 |
| hupe / urej protein | A5893_10185 | Not Available | Positive | 2441436 - 2442014 | 21876.6 |
| aminopeptidase | A5893_10190 | Not Available | Positive | 2442416 - 2444758 | 88758.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
