Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_00600 | Not Available | Positive | 199683 - 200021 | 13200.7 |
| hypothetical protein | A5893_00605 | Not Available | Positive | 200024 - 201061 | 39402.1 |
| dna-binding response regulator | A5893_00610 | Not Available | Positive | 201058 - 201798 | 28025.9 |
| dna ligase (nad(+)) liga | A5893_00615 | Not Available | Positive | 201825 - 203852 | 76895.4 |
| hypothetical protein | A5893_00620 | Not Available | Positive | 203964 - 204497 | 20476.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | A5893_00625 | Not Available | Positive | 204494 - 205375 | 31624.5 |
| ai-2e family transporter | A5893_00630 | Not Available | Positive | 205478 - 206569 | 40903.2 |
| hypothetical protein | A5893_00635 | Not Available | Negative | 206667 - 207800 | 42901.1 |
| deoxyhypusine synthase | A5893_00640 | Not Available | Positive | 207907 - 208887 | 36857.1 |
| hypothetical protein | A5893_00645 | Not Available | Negative | 208969 - 209184 | 7310.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
