Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_10045 | Not Available | Negative | 2411385 - 2412623 | 46159.1 |
| abc transporter permease | A5893_10050 | Not Available | Positive | 2412688 - 2413908 | 45946.2 |
| thioredoxin | A5893_10055 | Not Available | Positive | 2414075 - 2416081 | 77101.5 |
| peptidylprolyl isomerase | A5893_10060 | Not Available | Positive | 2416115 - 2416609 | 17971.9 |
| hypothetical protein | A5893_10065 | Not Available | Positive | 2416782 - 2416994 | 7720.1 |
| hypothetical protein | A5893_10070 | Not Available | Positive | 2417042 - 2417263 | 8082.92 |
| cold-shock protein | A5893_10075 | Not Available | Negative | 2417362 - 2417553 | 7027.23 |
| hypothetical protein | A5893_10080 | Not Available | Negative | 2417680 - 2418153 | 17826.7 |
| methylcrotonoyl-coa carboxylase | A5893_10085 | Not Available | Positive | 2418374 - 2420002 | 58948.2 |
| ribonucleoside-diphosphate reductase | A5893_10090 | Not Available | Positive | 2420606 - 2421574 | 37387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
