Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | A5893_09995 | Not Available | Negative | 2402035 - 2402655 | 23170.9 |
| hypothetical protein | A5893_10000 | Not Available | Positive | 2402886 - 2403107 | 8167.74 |
| preprotein translocase yidc | A5893_10005 | Not Available | Negative | 2403170 - 2404975 | 68439.6 |
| ctp synthetase | A5893_10010 | Not Available | Negative | 2405009 - 2406622 | 59867.3 |
| hypothetical protein | A5893_10015 | Not Available | Positive | 2406827 - 2407258 | 16999.7 |
| doxx family protein | A5893_10020 | Not Available | Negative | 2407270 - 2407647 | 13912.3 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | A5893_10025 | Not Available | Negative | 2407823 - 2408296 | 18337.5 |
| hypothetical protein | A5893_10030 | Not Available | Negative | 2408333 - 2408653 | 11889.3 |
| hypothetical protein | A5893_10035 | Not Available | Positive | 2408900 - 2409502 | 21958.1 |
| dna mismatch repair protein muts | A5893_10040 | Not Available | Positive | 2409587 - 2411377 | 68615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
