Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylglyoxal synthase | A5893_09945 | Not Available | Negative | 2390783 - 2391154 | 13288.3 |
| hypothetical protein | A5893_09950 | Not Available | Negative | 2391160 - 2392392 | 44083.2 |
| peptide chain release factor 3 | A5893_09955 | Not Available | Positive | 2392701 - 2394302 | 60072.7 |
| hypothetical protein | A5893_09960 | Not Available | Negative | 2394306 - 2395244 | 35419.7 |
| anthranilate phosphoribosyltransferase | A5893_09965 | Not Available | Positive | 2395443 - 2396441 | 36700.8 |
| n-(5'-phosphoribosyl)anthranilate isomerase | A5893_09970 | Not Available | Positive | 2396441 - 2397073 | 23966.6 |
| tryptophan synthase subunit beta | A5893_09975 | Not Available | Positive | 2397084 - 2398265 | 43143.9 |
| tryptophan synthase subunit alpha | A5893_09980 | Not Available | Positive | 2398353 - 2399126 | 28333.1 |
| sodium:proton antiporter | A5893_09985 | Not Available | Negative | 2399116 - 2400357 | 44787.3 |
| sodium:proton antiporter | A5893_09990 | Not Available | Negative | 2400563 - 2401762 | 43323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
