Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase | A5893_09875 | Not Available | Negative | 2375865 - 2376872 | 38970.6 |
| hypothetical protein | A5893_09880 | Not Available | Negative | 2377044 - 2377442 | 15776.8 |
| hypothetical protein | A5893_09885 | Not Available | Negative | 2377672 - 2378634 | 35608.4 |
| hypothetical protein | A5893_09890 | Not Available | Negative | 2378711 - 2381419 | 100938.0 |
| hypothetical protein | A5893_09895 | Not Available | Positive | 2381678 - 2382529 | 33380.0 |
| hypothetical protein | A5893_09900 | Not Available | Positive | 2382510 - 2383559 | 40702.2 |
| nad(p)-dependent oxidoreductase | A5893_09905 | Not Available | Negative | 2383639 - 2384544 | 32211.2 |
| dna topoisomerase iii | A5893_09910 | Not Available | Positive | 2385151 - 2386995 | 68942.0 |
| hypothetical protein | A5893_09920 | Not Available | Positive | 2387769 - 2388014 | 9392.23 |
| hypothetical protein | A5893_09925 | Not Available | Positive | 2388011 - 2388517 | 19478.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
