Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | A5893_09825 | Not Available | Negative | 2364679 - 2365869 | 45411.1 |
| nadh dehydrogenase | A5893_09830 | Not Available | Negative | 2365888 - 2366388 | 19594.6 |
| pyridoxamine 5'-phosphate oxidase | A5893_09835 | Not Available | Negative | 2366385 - 2367038 | 25184.6 |
| hypothetical protein | A5893_09840 | Not Available | Positive | 2367167 - 2367730 | 21286.1 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | A5893_09845 | Not Available | Negative | 2368015 - 2368518 | 17558.4 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | A5893_09850 | Not Available | Negative | 2368666 - 2369799 | 42723.2 |
| amidohydrolase | A5893_09855 | Not Available | Negative | 2370043 - 2373291 | 121034.0 |
| hypothetical protein | A5893_09860 | Not Available | Negative | 2373412 - 2374632 | 46432.2 |
| hypothetical protein | A5893_09865 | Not Available | Negative | 2374715 - 2374990 | 10378.1 |
| hypothetical protein | A5893_09870 | Not Available | Negative | 2375165 - 2375812 | 25418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
