Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | A5893_09775 | Not Available | Negative | 2354217 - 2354720 | 19761.6 |
| hypothetical protein | A5893_09780 | Not Available | Negative | 2354784 - 2355323 | 21648.8 |
| sodium:dicarboxylate symporter | A5893_09785 | Not Available | Positive | 2355366 - 2356742 | 49336.3 |
| hypothetical protein | A5893_09790 | Not Available | Positive | 2356744 - 2357238 | 19255.2 |
| phosphinothricin acetyltransferase | A5893_09795 | Not Available | Negative | 2357235 - 2357732 | 18931.8 |
| succinate-semialdehyde dehydrogenase | A5893_09800 | Not Available | Negative | 2357857 - 2359224 | 50277.6 |
| hypothetical protein | A5893_09805 | Not Available | Positive | 2359292 - 2360194 | 32804.1 |
| hypothetical protein | A5893_09810 | Not Available | Negative | 2360202 - 2361053 | 31368.1 |
| dead/deah box helicase | A5893_09815 | Not Available | Negative | 2361239 - 2363221 | 72000.6 |
| hypothetical protein | A5893_09820 | Not Available | Negative | 2363734 - 2364627 | 34312.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
