Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | A5893_09725 | Not Available | Negative | 2346194 - 2346688 | 18530.5 |
| hypothetical protein | A5893_09730 | Not Available | Positive | 2346760 - 2347380 | 22731.4 |
| polyphosphate kinase 1 | A5893_09735 | Not Available | Positive | 2347477 - 2349528 | 79754.4 |
| exopolyphosphatase | A5893_09740 | Not Available | Positive | 2349534 - 2350418 | 33068.2 |
| hypothetical protein | A5893_09745 | Not Available | Negative | 2350470 - 2350892 | 17164.6 |
| restriction endonuclease subunit r | A5893_09750 | Not Available | Negative | 2351073 - 2351543 | 18399.7 |
| dna polymerase iii subunit delta | A5893_09755 | Not Available | Positive | 2351615 - 2352619 | 38162.1 |
| ubiquinol-cytochrome c reductase | A5893_09760 | Not Available | Positive | 2352824 - 2353228 | 15706.8 |
| hypothetical protein | A5893_09765 | Not Available | Positive | 2353231 - 2353623 | 14865.2 |
| hypothetical protein | A5893_09770 | Not Available | Negative | 2353628 - 2354230 | 24010.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
