Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_09620 | Not Available | Positive | 2319680 - 2320582 | 35049.9 |
| hypothetical protein | A5893_09625 | Not Available | Positive | 2320648 - 2320926 | 10387.3 |
| hypothetical protein | A5893_09635 | Not Available | Positive | 2322604 - 2323707 | 42237.1 |
| hypothetical protein | A5893_09640 | Not Available | Positive | 2323742 - 2325508 | 69474.1 |
| hypothetical protein | A5893_09645 | Not Available | Positive | 2325505 - 2327589 | 82844.0 |
| deoxyribonuclease hsdr | A5893_09650 | Not Available | Positive | 2327650 - 2330838 | 122455.0 |
| Trna-ser | Not Available | Not Available | Positive | 2331260 - 2331344 | Not Available |
| hypothetical protein | A5893_09660 | Not Available | Negative | 2331616 - 2332461 | 30941.3 |
| hypothetical protein | A5893_09665 | Not Available | Negative | 2332511 - 2333446 | 32799.0 |
| phosphoenolpyruvate carboxylase | A5893_09670 | Not Available | Positive | 2333699 - 2336287 | 99296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
