Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_00550 | Not Available | Negative | 189818 - 190246 | 16352.5 |
| hypothetical protein | A5893_00555 | Not Available | Negative | 190250 - 190432 | 7143.57 |
| molecular chaperone groel | A5893_00560 | Not Available | Negative | 190687 - 192333 | 57952.8 |
| co-chaperone groes | A5893_00565 | Not Available | Negative | 192480 - 192773 | 10357.5 |
| hypothetical protein | A5893_00570 | Not Available | Positive | 193120 - 193605 | 18669.1 |
| nuclease pin | A5893_00575 | Not Available | Negative | 193607 - 194458 | 31735.7 |
| glutamine--trna ligase | A5893_00580 | Not Available | Negative | 194738 - 196420 | 65065.9 |
| alanine dehydrogenase | A5893_00585 | Not Available | Negative | 196669 - 197814 | 41689.7 |
| hypothetical protein | A5893_00590 | Not Available | Positive | 197978 - 198745 | 30054.3 |
| hypothetical protein | A5893_00595 | Not Available | Positive | 198855 - 199667 | 29999.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
