Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | A5893_09565 | Not Available | Positive | 2302199 - 2304634 | 90997.1 |
| sulfatase | A5893_09570 | Not Available | Positive | 2304708 - 2305787 | 40241.7 |
| alpha-mannosidase | A5893_09575 | Not Available | Positive | 2306232 - 2308511 | 86089.5 |
| sugar hydrolase | A5893_09580 | Not Available | Positive | 2308639 - 2310924 | 86485.6 |
| abc transporter atp-binding protein | A5893_09585 | Not Available | Positive | 2311100 - 2312935 | 69268.6 |
| nad-binding protein | A5893_09590 | Not Available | Positive | 2313034 - 2314032 | 37197.7 |
| hypothetical protein | A5893_09595 | Not Available | Positive | 2314191 - 2314484 | 11066.9 |
| hypothetical protein | A5893_09600 | Not Available | Negative | 2314596 - 2316302 | 65124.4 |
| aldehyde dehydrogenase | A5893_09605 | Not Available | Negative | 2316423 - 2316881 | 17049.0 |
| hypothetical protein | A5893_09615 | Not Available | Positive | 2318573 - 2319628 | 40339.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
