Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | A5893_09515 | Not Available | Positive | 2286716 - 2287465 | 26213.8 |
| hypothetical protein | A5893_09520 | Not Available | Positive | 2287477 - 2287989 | 19308.4 |
| short-chain dehydrogenase/reductase | A5893_09525 | Not Available | Positive | 2287979 - 2288812 | 30457.6 |
| glycosyl hydrolase family 5 | A5893_09530 | Not Available | Negative | 2288957 - 2290204 | 48429.1 |
| hypothetical protein | A5893_09535 | Not Available | Positive | 2290604 - 2292448 | 69256.2 |
| hypothetical protein | A5893_09540 | Not Available | Positive | 2292635 - 2294509 | 64798.8 |
| hypothetical protein | A5893_09545 | Not Available | Positive | 2294663 - 2296495 | 69441.9 |
| hypothetical protein | A5893_09550 | Not Available | Positive | 2296520 - 2298028 | 57141.0 |
| glycosyl hydrolase | A5893_09555 | Not Available | Positive | 2298088 - 2300709 | 97870.7 |
| hypothetical protein | A5893_09560 | Not Available | Positive | 2300721 - 2302073 | 49292.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
