Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylmenaquinone methyltransferase | A5893_09365 | Not Available | Negative | 2243121 - 2243864 | 27874.7 |
| mannonate dehydratase | A5893_09370 | Not Available | Negative | 2243887 - 2244855 | 36314.7 |
| sodium transporter | A5893_09375 | Not Available | Negative | 2244857 - 2246530 | 61452.4 |
| hypothetical protein | A5893_09380 | Not Available | Negative | 2246644 - 2247810 | 43206.2 |
| d-mannonate oxidoreductase | A5893_09385 | Not Available | Negative | 2247913 - 2248755 | 29611.8 |
| uronate isomerase | A5893_09390 | Not Available | Negative | 2248758 - 2250158 | 53243.8 |
| hypothetical protein | A5893_09395 | Not Available | Positive | 2250475 - 2251362 | 34377.6 |
| hypothetical protein | A5893_09400 | Not Available | Positive | 2251670 - 2253115 | 51796.0 |
| hypothetical protein | A5893_09405 | Not Available | Positive | 2253648 - 2256800 | 116116.0 |
| hypothetical protein | A5893_09410 | Not Available | Positive | 2256778 - 2258760 | 74093.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
