Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2223049 - 2223131 | Not Available |
| beta-glucosidase | A5893_09315 | Not Available | Positive | 2223547 - 2225760 | 82798.8 |
| hypothetical protein | A5893_09320 | Not Available | Positive | 2225863 - 2227935 | 77870.3 |
| glycosyl hydrolase | A5893_09325 | Not Available | Positive | 2228146 - 2230482 | 85069.3 |
| acetylxylan esterase | A5893_09335 | Not Available | Positive | 2233784 - 2235088 | 48450.6 |
| tat pathway signal protein | A5893_09340 | Not Available | Positive | 2235148 - 2236581 | 53951.9 |
| hypothetical protein | A5893_09345 | Not Available | Negative | 2236589 - 2236966 | 13896.6 |
| hypothetical protein | A5893_09350 | Not Available | Positive | 2237492 - 2237707 | 8078.26 |
| alpha-mannosidase | A5893_09355 | Not Available | Negative | 2237837 - 2240104 | 84441.9 |
| fad-binding protein | A5893_09360 | Not Available | Negative | 2240114 - 2243038 | 108272.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
