Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_09255 | Not Available | Positive | 2210849 - 2212852 | 76214.2 |
| dihydroorotase | A5893_09260 | Not Available | Positive | 2212859 - 2214118 | 46195.5 |
| hypothetical protein | A5893_09265 | Not Available | Positive | 2214136 - 2214804 | 25981.3 |
| hypothetical protein | A5893_09270 | Not Available | Positive | 2214829 - 2215386 | 20326.1 |
| glycosyl transferase family 2 | A5893_09275 | Not Available | Positive | 2215500 - 2216456 | 36468.3 |
| hypothetical protein | A5893_09285 | Not Available | Positive | 2217567 - 2218319 | 28214.2 |
| hypothetical protein | A5893_09290 | Not Available | Positive | 2218319 - 2219824 | 57079.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | A5893_09295 | Not Available | Positive | 2219906 - 2221057 | 42112.7 |
| rip metalloprotease rsep | A5893_09300 | Not Available | Positive | 2221085 - 2222410 | 48511.6 |
| molecular chaperone hsc20 | A5893_09305 | Not Available | Positive | 2222495 - 2223025 | 20989.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
