Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase ruvb | A5893_09205 | Not Available | Negative | 2200731 - 2201753 | 37509.1 |
| nadh dehydrogenase | A5893_09210 | Not Available | Negative | 2202115 - 2202597 | 17879.9 |
| nadh dehydrogenase | A5893_09215 | Not Available | Negative | 2202597 - 2203169 | 21899.0 |
| dna-binding protein | A5893_09220 | Not Available | Positive | 2203559 - 2204755 | 43761.6 |
| prevent-host-death protein | A5893_09225 | Not Available | Positive | 2204820 - 2205071 | 9803.82 |
| hypothetical protein | A5893_09230 | Not Available | Positive | 2205068 - 2205322 | 10132.1 |
| hypothetical protein | A5893_09235 | Not Available | Positive | 2205388 - 2206095 | 27499.7 |
| alanine--trna ligase | A5893_09240 | Not Available | Positive | 2206173 - 2208860 | 101435.0 |
| hypothetical protein | A5893_09245 | Not Available | Negative | 2208867 - 2209505 | 24666.7 |
| 2,3-diketo-l-gulonate reductase | A5893_09250 | Not Available | Positive | 2209771 - 2210757 | 36440.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
