Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | A5893_09155 | Not Available | Negative | 2189944 - 2190774 | 28979.8 |
| biopolymer transporter exbd | A5893_09160 | Not Available | Negative | 2190771 - 2191169 | 14753.1 |
| biopolymer transporter exbb | A5893_09165 | Not Available | Negative | 2191166 - 2191870 | 25175.4 |
| hypothetical protein | A5893_09170 | Not Available | Negative | 2191879 - 2192940 | 39832.3 |
| hypothetical protein | A5893_09175 | Not Available | Negative | 2192987 - 2194744 | 65311.6 |
| hypothetical protein | A5893_09180 | Not Available | Negative | 2194731 - 2197754 | 115636.0 |
| aspartate carbamoyltransferase | A5893_09185 | Not Available | Negative | 2197890 - 2198828 | 34504.4 |
| pyrr protein | A5893_09190 | Not Available | Negative | 2198835 - 2199377 | 20509.9 |
| hypothetical protein | A5893_09195 | Not Available | Positive | 2199551 - 2200036 | 18742.7 |
| hypothetical protein | A5893_09200 | Not Available | Negative | 2200068 - 2200703 | 24539.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
