Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | A5893_00500 | Not Available | Negative | 180060 - 180494 | 15684.0 |
| polysaccharide biosynthesis protein | A5893_00505 | Not Available | Negative | 180491 - 181840 | 51774.9 |
| acylphosphatase | A5893_00510 | Not Available | Negative | 181981 - 182253 | 10242.3 |
| amidohydrolase | A5893_00515 | Not Available | Negative | 182333 - 183496 | 44050.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | A5893_00520 | Not Available | Positive | 183659 - 184708 | 39430.4 |
| hypothetical protein | A5893_00525 | Not Available | Positive | 184715 - 185413 | 26182.7 |
| hypothetical protein | A5893_00530 | Not Available | Positive | 185438 - 186817 | 51268.8 |
| hypothetical protein | A5893_00535 | Not Available | Negative | 187081 - 188667 | 58839.1 |
| endonuclease v | A5893_00540 | Not Available | Negative | 188803 - 189501 | 26151.7 |
| hypothetical protein | A5893_00545 | Not Available | Positive | 189649 - 189843 | 7467.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
