Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_09050 | Not Available | Positive | 2169826 - 2171070 | 45960.4 |
| cytidylate kinase | A5893_09055 | Not Available | Negative | 2171063 - 2171737 | 25652.7 |
| hypothetical protein | A5893_09060 | Not Available | Negative | 2171781 - 2172821 | 38141.6 |
| hypothetical protein | A5893_09065 | Not Available | Positive | 2172846 - 2173253 | 15725.1 |
| hypothetical protein | A5893_09070 | Not Available | Negative | 2173402 - 2174583 | 44749.2 |
| aspartate kinase | A5893_09075 | Not Available | Negative | 2174576 - 2175835 | 48017.5 |
| gnat family acetyltransferase | A5893_09080 | Not Available | Negative | 2175837 - 2176304 | 18142.6 |
| yggs family pyridoxal phosphate enzyme | A5893_09085 | Not Available | Negative | 2176304 - 2176999 | 26515.8 |
| hypothetical protein | A5893_09090 | Not Available | Positive | 2177113 - 2177511 | 15445.0 |
| dna mismatch repair protein muts | A5893_09095 | Not Available | Positive | 2177492 - 2179855 | 89243.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
