Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-phosphate glycerol 3-phosphate acyltransferase | A5893_09000 | Not Available | Positive | 2156913 - 2157650 | 28850.3 |
| glutamyl-trna amidotransferase | A5893_09005 | Not Available | Positive | 2157763 - 2158053 | 11092.3 |
| macrolide abc transporter atp-binding protein | A5893_09010 | Not Available | Positive | 2158368 - 2159090 | 26274.9 |
| cob(i)yrinic acid a c-diamide adenosyltransferase | A5893_09015 | Not Available | Positive | 2159204 - 2159752 | 20980.5 |
| hypothetical protein | A5893_09020 | Not Available | Positive | 2159829 - 2160050 | 8600.66 |
| hypothetical protein | A5893_09025 | Not Available | Negative | 2160435 - 2163836 | 131624.0 |
| exodeoxyribonuclease v subunit gamma | A5893_09030 | Not Available | Negative | 2163829 - 2167038 | 124356.0 |
| exodeoxyribonuclease v subunit alpha | A5893_09035 | Not Available | Negative | 2167192 - 2168964 | 67150.1 |
| hypothetical protein | A5893_09040 | Not Available | Positive | 2169115 - 2169573 | 17270.7 |
| hypothetical protein | A5893_09045 | Not Available | Positive | 2169624 - 2169842 | 8362.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
